WormBase Tree Display for Variation: WBVar01301576
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WBVar01301576 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01301576 | |||||
Other_name | cewivar00008469 | ||||||
ZC239.14.1:c.436A>C | |||||||
CE42889:p.Arg146= | |||||||
HGVSg | CHROMOSOME_II:g.3221483T>G | ||||||
Sequence_details | SMap | S_parent | Sequence | ZC239 | |||
Flanking_sequences | ATACTTCTCAATGAACGCACGCGCATCGAAATTATCTGGAAGGGACACCC | AAGCAGTATATCGGTATTATGTACGTATCCAATAATGAGCAATGGCTGAA | |||||
Mapping_target | ZC239 | ||||||
Type_of_mutation | Substitution | t | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (21) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539159699 | |||
Status | Live | ||||||
Affects | Gene | WBGene00022572 | |||||
Transcript | ZC239.14.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | ZC239.14.1:c.436A>C | ||||||
HGVSp | CE42889:p.Arg146= | ||||||
cDNA_position | 460 | ||||||
CDS_position | 436 | ||||||
Protein_position | 146 | ||||||
Exon_number | 4/6 | ||||||
Codon_change | Agg/Cgg | ||||||
Amino_acid_change | R | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |