WormBase Tree Display for Variation: WBVar01286040
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WBVar01286040 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01286040 | |||||
Other_name | cewivar00324385 | ||||||
R06C1.6.1:c.1186+233T>C | |||||||
R06C1.11:n.76T>C | |||||||
HGVSg | CHROMOSOME_I:g.11952065T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | R06C1 | |||
Flanking_sequences | ATCTAAAAAAAATGCGGGAGAAGAGACGCAGAGTTTTCGACTGATGTTAA | GATTAAGAACGTGCTGACGTCACATTTGTTTGGACAAAAAATTCCCGCAT | |||||
Mapping_target | R06C1 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (17) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539145716 | |||
History | Acquires_merge | WBVar01424942 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00200101 | |||||
WBGene00011060 | |||||||
Transcript | R06C1.11 | VEP_consequence | non_coding_transcript_exon_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | R06C1.11:n.76T>C | ||||||
cDNA_position | 76 | ||||||
Exon_number | 1/1 | ||||||
R06C1.6.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | R06C1.6.1:c.1186+233T>C | ||||||
Intron_number | 6/7 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |