WormBase Tree Display for Variation: WBVar01281348

WBVar01281348 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01281348
    Other_name: cewivar00505227
      C09D1.1b.1:c.461+295T>A
      C09D1.1m.1:c.461+295T>A
      C09D1.1o.1:c.461+295T>A
      C09D1.1k.1:c.461+295T>A
      C09D1.1l.1:c.461+295T>A
      C09D1.1a.1:c.461+295T>A
      C09D1.1e.1:c.461+295T>A
      C09D1.1n.1:c.461+295T>A
      C09D1.1f.1:c.461+295T>A
    HGVSg: CHROMOSOME_I:g.4037378T>A
  Sequence_details: SMap: S_parent: Sequence: C09D1
    Flanking_sequences: TTTAAAATCTATCAAATTTTGTAGAAATCATGCCGAATTGAAATCACGGT GCATCAGGCTTAAGTTTTTTTCTAAAATTTTTCAATAGAATATTTCGAAC
    Mapping_target: C09D1
    Type_of_mutation: Substitution: t A Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539141494
    Status: Live
  Affects: Gene: WBGene00006820
    Transcript: C09D1.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1b.1:c.461+295T>A
        Intron_number: 3/48
      C09D1.1o.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1o.1:c.461+295T>A
        Intron_number: 3/32
      C09D1.1k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1k.1:c.461+295T>A
        Intron_number: 3/46
      C09D1.1l.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1l.1:c.461+295T>A
        Intron_number: 3/32
      C09D1.1n.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1n.1:c.461+295T>A
        Intron_number: 3/46
      C09D1.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1a.1:c.461+295T>A
        Intron_number: 4/35
      C09D1.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1e.1:c.461+295T>A
        Intron_number: 3/31
      C09D1.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1f.1:c.461+295T>A
        Intron_number: 3/45
      C09D1.1m.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09D1.1m.1:c.461+295T>A
        Intron_number: 3/47
  Reference: WBPaper00037807
  Method: WGS_De_Bono