WormBase Tree Display for Variation: WBVar01280827
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WBVar01280827 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01280827 | |||||
Other_name | cewivar00504823 | ||||||
F21A9.2.1:c.145-11T>A | |||||||
HGVSg | CHROMOSOME_I:g.3708502A>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F21A9 | |||
Flanking_sequences | CCATCTCGAAACCCATCGATTCACCGGTGAAGTTGGAGAGCTGGAAATTA | GGAGGTTCTACGGTGCATTTGTGCGGGGAATATGGTGTATTGTGTCTGTC | |||||
Mapping_target | F21A9 | ||||||
Type_of_mutation | Substitution | a | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | WGS_De_Bono | ||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
WBStrain00023224 | From_analysis | WGS_Andersen | |||||
WBStrain00023234 | From_analysis | WGS_Andersen | |||||
WBStrain00023280 | From_analysis | WGS_Andersen | |||||
WBStrain00023281 | From_analysis | WGS_Andersen | |||||
WBStrain00023311 | From_analysis | WGS_Andersen | |||||
WBStrain00031279 | From_analysis | WGS_Andersen | |||||
WBStrain00031284 | From_analysis | WGS_Andersen | |||||
Laboratory | AX | ||||||
QX | |||||||
Person | WBPerson1730 | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539141024 | |||
History | Acquires_merge | WBVar01431170 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00017651 | |||||
Transcript | F21A9.2.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | F21A9.2.1:c.145-11T>A | ||||||
Intron_number | 3/10 | ||||||
Reference | WBPaper00040707 | ||||||
WBPaper00037807 | |||||||
Method | WGS_De_Bono |