WormBase Tree Display for Variation: WBVar01280401

WBVar01280401 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01280401
    Other_name: cewivar00504578
      C45E1.1a.1:c.221-281C>T
      C45E1.1b.1:c.146-281C>T
      C45E1.1a.2:c.221-281C>T
      C45E1.1c.1:c.239-281C>T
    HGVSg: CHROMOSOME_I:g.3107237C>T
  Sequence_details: SMap: S_parent: Sequence: C45E1
    Flanking_sequences: GGCAAATTGGCAAACCGGCAATTTGCTGGAATTGAGAATTTCCGGCAAAT GGCAAACCAGCAAATTGCAGGAAATTACGATTCCAACAATTTGCTGGTTT
    Mapping_target: C45E1
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539140641
    Status: Live
  Affects: Gene: WBGene00003654
    Transcript: C45E1.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1b.1:c.146-281C>T
        Intron_number: 1/6
      C45E1.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1c.1:c.239-281C>T
        Intron_number: 3/8
      C45E1.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1a.2:c.221-281C>T
        Intron_number: 4/10
      C45E1.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1a.1:c.221-281C>T
        Intron_number: 3/9
  Reference: WBPaper00037807
  Method: WGS_De_Bono