Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar01280396

expand all nodes | collapse all nodes | view schema

Name Class

WBVar01280396EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01280396
Other_namecewivar00072448
C45E1.1b.1:c.145+821G>A
C45E1.1c.1:c.163+821G>A
C45E1.1a.1:c.145+821G>A
C45E1.1a.2:c.145+821G>A
HGVSgCHROMOSOME_I:g.3105333G>A
Sequence_detailsSMapS_parentSequenceC45E1
Flanking_sequencesGGGTTTCTCTTTTTAATGCTCCAACGGCTCTTGAAATCTTGGGGGGGGGGTCACATTTCGTTCCGGAATAACAAAAGATGTATAGAGAAACCGATTTTTT
Mapping_targetC45E1
Type_of_mutationSubstitutiongAPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (16)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539140636
StatusLive
AffectsGeneWBGene00003654
TranscriptC45E1.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1b.1:c.145+821G>A
Intron_number1/6
C45E1.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1c.1:c.163+821G>A
Intron_number2/8
C45E1.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1a.2:c.145+821G>A
Intron_number3/10
C45E1.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1a.1:c.145+821G>A
Intron_number2/9
ReferenceWBPaper00037807
MethodWGS_De_Bono