WormBase Tree Display for Variation: WBVar01262723
expand all nodes | collapse all nodes | view schema
WBVar01262723 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01262723 | |||||
Other_name | cewivar00386841 | ||||||
E03A3.6b.1:c.-44-1105T>C | |||||||
E03A3.6a.1:c.3557-121T>C | |||||||
HGVSg | CHROMOSOME_III:g.4077549T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | E03A3 | |||
Flanking_sequences | TCTCTATCTTTTCAATTTGCAATTTTTTCATTTTTAAAGTCGGCGGAAAA | TGAGTTCGAAGGTGATTCTTTTGAATTTGCCAGGCAAATACACCTTGTCT | |||||
Mapping_target | E03A3 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539098395 | |||
Status | Live | ||||||
Affects | Gene | WBGene00006811 | |||||
Transcript | E03A3.6a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | E03A3.6a.1:c.3557-121T>C | ||||||
Intron_number | 14/27 | ||||||
E03A3.6b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | E03A3.6b.1:c.-44-1105T>C | ||||||
Intron_number | 13/26 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |