Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar01260930

expand all nodes | collapse all nodes | view schema

Name Class

WBVar01260930EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01260930
Other_namecewivar00149787
Y55D5A.5e.1:c.4941+153A>T
Y55D5A.5f.1:c.2739+153A>T
Y55D5A.5d.1:c.5028+153A>T
Y55D5A.5a.1:c.5169+153A>T
Y55D5A.5c.1:c.5415+153A>T
Y55D5A.5g.1:c.1647+153A>T
HGVSgCHROMOSOME_III:g.2998509T>A
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesAATTAGAAAATTTCAATTATCAAATTAAAAAACGAATTTTTCATTTTTTTAAATTATAAACGCTGGAAAAATGTACGTTTTTTTTTACAATTTTAGCTGA
Mapping_targetY55D5A
Type_of_mutationSubstitutiontAPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (14)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539096780
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5g.1:c.1647+153A>T
Intron_number2/3
Y55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.4941+153A>T
Intron_number13/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.2739+153A>T
Intron_number6/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.5169+153A>T
Intron_number16/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.5415+153A>T
Intron_number18/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.5028+153A>T
Intron_number14/15
ReferenceWBPaper00037807
MethodWGS_De_Bono