WormBase Tree Display for Variation: WBVar01252554
expand all nodes | collapse all nodes | view schema
| WBVar01252554 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01252554 | |||||
| Other_name | cewivar00328577 | ||||||
| CE42702:p.Gly342= | |||||||
| Y48B6A.3.1:c.1026A>T | |||||||
| HGVSg | CHROMOSOME_II:g.14158050A>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | Y48B6A | |||
| Flanking_sequences | GACGTCGAGCGGGCTCTGGATGATTGGGTTTTCCTGTGCTTCTTCGTCGG | AACGACTTCCTTCCACATTTACCATCGCTCGAGATCCGAGAAGGGGCAAT | |||||
| Mapping_target | Y48B6A | ||||||
| Type_of_mutation | Substitution | a | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain (15) | |||||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539089243 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00006964 | |||||
| Transcript | Y48B6A.3.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | ||||||
| HGVSc | Y48B6A.3.1:c.1026A>T | ||||||
| HGVSp | CE42702:p.Gly342= | ||||||
| cDNA_position | 1045 | ||||||
| CDS_position | 1026 | ||||||
| Protein_position | 342 | ||||||
| Exon_number | 4/9 | ||||||
| Codon_change | ggA/ggT | ||||||
| Amino_acid_change | G | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
