WormBase Tree Display for Variation: WBVar01239251
expand all nodes | collapse all nodes | view schema
WBVar01239251 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01239251 | ||||
Other_name | cewivar00683549 | |||||
T23F4.1:n.524-470del | ||||||
HGVSg | CHROMOSOME_II:g.1168438del | |||||
Sequence_details | SMap | S_parent | Sequence | T23F4 | ||
Flanking_sequences | TTTCATATAAAATCCAAAATTAGCAAGCATTTTTGCCCTATAATTTGCTG | AAAAAAAGCCAATTTTGATGTGGAGCCTAGAAAAATGATTAGTATCGTCG | ||||
Mapping_target | T23F4 | |||||
Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_De_Bono | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539005562 | ||
Status | Live | |||||
Affects | Gene | WBGene00020739 | ||||
Pseudogene | T23F4.1 | VEP_consequence | intron_variant,non_coding_transcript_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | T23F4.1:n.524-470del | |||||
Intron_number | 4/4 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |