WormBase Tree Display for Variation: WBVar00603945
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| WBVar00603945 | Evidence | Paper_evidence | WBPaper00040574 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | n5418 | |||||
| HGVSg | CHROMOSOME_I:g.9616560_9618260del | ||||||
| Sequence_details | SMap | S_parent | Sequence | K07A1 | |||
| Flanking_sequences | ataggaatgtgatttttacattcaaagatc | tcaaggtaacattttaactttaaaaacttag | |||||
| Mapping_target | K07A1 | ||||||
| Type_of_mutation | Deletion | ||||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00027614 | ||||||
| Laboratory | MT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00004312 | |||||
| WBGene00003036 | |||||||
| Transcript | K07A1.11.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,3_prime_UTR_variant,intron_variant | ||||
| VEP_impact | HIGH | ||||||
| cDNA_position | ?-1291 | ||||||
| Intron_number | 2-6/7 | ||||||
| Exon_number | 1-8/8 | ||||||
| K07A1.12.1 | VEP_consequence | 3_prime_UTR_variant | |||||
| VEP_impact | MODIFIER | ||||||
| cDNA_position | 1400-? | ||||||
| Exon_number | 5/5 | ||||||
| Interactor | WBInteraction000501350 | ||||||
| Genetics | Interpolated_map_position | I | 3.80798 | ||||
| Description | Phenotype | WBPhenotype:0000050 | Paper_evidence | WBPaper00040574 | |||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | This deletion mutant displays maternal-effect embryonic lethality. | Paper_evidence | WBPaper00040574 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| Maternal | With_maternal_effect | Paper_evidence | WBPaper00040574 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000216 | Paper_evidence | WBPaper00040574 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Heterozygous deletion mutant do not show M1 transformations. | Paper_evidence | WBPaper00040574 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| Reference | WBPaper00040574 | ||||||
| Method | Deletion_allele |
