WormBase Tree Display for Variation: WBVar00583636
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WBVar00583636 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00583636 | |||
Other_name | haw163771 | ||||
cewivar00228449 | |||||
CE13790:p.Leu383= | |||||
T20D4.6.1:c.1149T>A | |||||
HGVSg | CHROMOSOME_V:g.3412439T>A | ||||
Sequence_details | SMap | S_parent | Sequence | T20D4 | |
Flanking_sequences | CTACCAATGACCGACGATTCCGAGAAAGGCACCGATGCACCATATCCACT | GGCTTGTACCCTAATGTCAATGATGTGAATCTTCCATATCCAAGCGTAGT | |||
Mapping_target | T20D4 | ||||
Type_of_mutation | Substitution | t | a | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Yanai | |||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020612 | |||
Transcript | T20D4.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T20D4.6.1:c.1149T>A | ||||
HGVSp | CE13790:p.Leu383= | ||||
cDNA_position | 1156 | ||||
CDS_position | 1149 | ||||
Protein_position | 383 | ||||
Exon_number | 5/7 | ||||
Codon_change | ctT/ctA | ||||
Amino_acid_change | L | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |