WormBase Tree Display for Variation: WBVar00571933
expand all nodes | collapse all nodes | view schema
| WBVar00571933 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00571933 | |||
| Other_name | haw152068 | ||||
| cewivar00205340 | |||||
| W02C12.3e.1:c.187-3979T>C | |||||
| W02C12.3c.1:c.367-3979T>C | |||||
| W02C12.3j.1:c.214-3979T>C | |||||
| W02C12.3i.1:c.214-3979T>C | |||||
| W02C12.3d.1:c.187-3979T>C | |||||
| W02C12.3d.2:c.187-3979T>C | |||||
| W02C12.3b.1:c.367-3979T>C | |||||
| HGVSg | CHROMOSOME_IV:g.4022561A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | W02C12 | |
| Flanking_sequences | TACAGCTCCAGTCAACCGAGATGATGATAAGGACGGAGACGCAGAACAAA | TGAAAAACGAGCGAAAAGTACGTGGTTTTATGGAGCCATAAAACGCGTAT | |||
| Mapping_target | W02C12 | ||||
| Type_of_mutation | Substitution | a | g | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Yanai | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson4037 | ||||
| Analysis | WGS_Yanai | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020930 | |||
| Transcript | W02C12.3e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02C12.3e.1:c.187-3979T>C | ||||
| Intron_number | 1/9 | ||||
| W02C12.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02C12.3d.1:c.187-3979T>C | ||||
| Intron_number | 1/10 | ||||
| W02C12.3j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02C12.3j.1:c.214-3979T>C | ||||
| Intron_number | 2/9 | ||||
| W02C12.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02C12.3b.1:c.367-3979T>C | ||||
| Intron_number | 3/11 | ||||
| W02C12.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02C12.3c.1:c.367-3979T>C | ||||
| Intron_number | 3/12 | ||||
| W02C12.3i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02C12.3i.1:c.214-3979T>C | ||||
| Intron_number | 2/10 | ||||
| W02C12.3d.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02C12.3d.2:c.187-3979T>C | ||||
| Intron_number | 2/11 | ||||
| Reference | WBPaper00038208 | ||||
| Method | WGS_Yanai |
