WormBase Tree Display for Variation: WBVar00562222

WBVar00562222 Name: Public_name: WBVar00562222
    Other_name: haw142357
      cewivar00195749
      Y55D5A.11:n.315T>C
      Y55D5A.5c.1:c.-99+3553T>C
    HGVSg: CHROMOSOME_III:g.3037229A>G
  Sequence_details: SMap: S_parent: Sequence: Y55D5A
    Flanking_sequences: ATCATGAACATTGCCGAGAAATAACGAGAGCCCAGAAGTGGGTGGCGCTT CATAAGCTCCGCCCATTTAAAGGCTAAAAATTCTCATTTTACTTTGAGCT
    Mapping_target: Y55D5A
    Type_of_mutation: Substitution: a g
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (17)
    Laboratory: AX
    Person: WBPerson4037
    Analysis: WGS_Yanai
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01329533
    Status: Live
  Affects: Gene: WBGene00000898
      WBGene00219761
    Transcript: Y55D5A.5c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.5c.1:c.-99+3553T>C
        Intron_number: 1/20
      Y55D5A.11 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.11:n.315T>C
        cDNA_position: 315
        Exon_number: 1/1
  Reference: WBPaper00038208
    WBPaper00037807
  Method: WGS_Yanai