WormBase Tree Display for Variation: WBVar00559221
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| WBVar00559221 | Name | Public_name | WBVar00559221 | ||
|---|---|---|---|---|---|
| Other_name | haw139356 | ||||
| cewivar00146747 | |||||
| C09F5.1b.1:c.837A>G | |||||
| C09F5.1a.1:c.1416A>G | |||||
| CE44860:p.Ala472= | |||||
| CE52548:p.Ala279= | |||||
| HGVSg | CHROMOSOME_III:g.661972A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C09F5 | |
| Flanking_sequences | TAGTGTACCAGCATTTGAAAATATAAAAATAACCATATTTTTTCAGATGC | TCATGCAGTGAATGTTATGACTTTTGCTTGCCGGATTGGGCAGTTGTGAG | |||
| Mapping_target | C09F5 | ||||
| Type_of_mutation | Substitution | a | g | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (12) | |||||
| Laboratory | AX | ||||
| Person | WBPerson4037 | ||||
| Analysis | WGS_Yanai | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01254900 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00015647 | |||
| Transcript | C09F5.1a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C09F5.1a.1:c.1416A>G | ||||
| HGVSp | CE44860:p.Ala472= | ||||
| cDNA_position | 1433 | ||||
| CDS_position | 1416 | ||||
| Protein_position | 472 | ||||
| Exon_number | 9/11 | ||||
| Codon_change | gcA/gcG | ||||
| Amino_acid_change | A | ||||
| C09F5.1b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C09F5.1b.1:c.837A>G | ||||
| HGVSp | CE52548:p.Ala279= | ||||
| cDNA_position | 856 | ||||
| CDS_position | 837 | ||||
| Protein_position | 279 | ||||
| Exon_number | 7/9 | ||||
| Codon_change | gcA/gcG | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Yanai |
