WormBase Tree Display for Variation: WBVar00559218
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| WBVar00559218 | Name | Public_name | WBVar00559218 | ||
|---|---|---|---|---|---|
| Other_name | haw139353 | ||||
| cewivar00146736 | |||||
| C09F5.1a.1:c.1263+108A>T | |||||
| C09F5.1b.1:c.684+108A>T | |||||
| HGVSg | CHROMOSOME_III:g.661488A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C09F5 | |
| Flanking_sequences | AAAAAATTTAAGGATCCAACAAAATTGAACTCAGAATCTGTCAGAAATTA | TTTAAACCTACCAGGAAATAGACGGATCTATCAGTTGACTCCAGGACCTA | |||
| Mapping_target | C09F5 | ||||
| Type_of_mutation | Substitution | a | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (11) | |||||
| Laboratory | AX | ||||
| Person | WBPerson4037 | ||||
| Analysis | WGS_Yanai | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01389335 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00015647 | |||
| Transcript | C09F5.1a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09F5.1a.1:c.1263+108A>T | ||||
| Intron_number | 7/10 | ||||
| C09F5.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09F5.1b.1:c.684+108A>T | ||||
| Intron_number | 5/8 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Yanai |
