WormBase Tree Display for Variation: WBVar00556355
expand all nodes | collapse all nodes | view schema
WBVar00556355 | Name | Public_name | WBVar00556355 | ||
---|---|---|---|---|---|
Other_name | haw136490 | ||||
cewivar00188863 | |||||
F01D5.5.1:c.297T>A | |||||
CE18562:p.Ala99= | |||||
HGVSg | CHROMOSOME_II:g.14001995A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F01D5 | |
Flanking_sequences | GGGAGCCGAATTTAAACTTACTTTGAGCTGTTATCATGACAATTTGGATC | GCAGTTGGTGGTTCTGGGGTAGTGGCTCCTGGGCACATGTTACAGGTTAC | |||
Mapping_target | F01D5 | ||||
Type_of_mutation | Substitution | a | t | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01383513 | |||
Status | Live | ||||
Affects | Gene | WBGene00008495 | |||
Transcript | F01D5.5.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F01D5.5.1:c.297T>A | ||||
HGVSp | CE18562:p.Ala99= | ||||
cDNA_position | 306 | ||||
CDS_position | 297 | ||||
Protein_position | 99 | ||||
Exon_number | 2/4 | ||||
Codon_change | gcT/gcA | ||||
Amino_acid_change | A | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Yanai |