WormBase Tree Display for Variation: WBVar00555376

WBVar00555376 Name: Public_name: WBVar00555376
    Other_name: haw135511
      cewivar00097993
      Y48C3A.4b.1:c.771-509C>T
      Y48C3A.5b.1:c.639+2248G>A
      Y48C3A.5a.1:c.639+2248G>A
      Y48C3A.5d.1:c.504+2248G>A
      Y48C3A.4a.1:c.762-503C>T
    HGVSg: CHROMOSOME_II:g.13282016G>A
  Sequence_details: SMap: S_parent: Sequence: Y48C3A
    Flanking_sequences: AAGCCACGCCCGTTTTGTGGACGGAGACTACAAATCACGCCTATTTTATG GCAGAGTCTGCAAGGCGCGCATATTTTATGGGCGGAGCCTGCAAGCCACG
    Mapping_target: Y48C3A
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (12)
    Laboratory: AX
    Person: WBPerson4037
    Analysis: WGS_Yanai
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01381369
    Status: Live
  Affects: Gene: WBGene00012989
      WBGene00012988
    Transcript: Y48C3A.5d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5d.1:c.504+2248G>A
        Intron_number: 4/9
      Y48C3A.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.4b.1:c.771-509C>T
        Intron_number: 4/6
      Y48C3A.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5b.1:c.639+2248G>A
        Intron_number: 4/11
      Y48C3A.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5a.1:c.639+2248G>A
        Intron_number: 4/10
      Y48C3A.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.4a.1:c.762-503C>T
        Intron_number: 4/6
  Reference: WBPaper00038208
    WBPaper00037807
  Method: WGS_Yanai