WormBase Tree Display for Variation: WBVar00553082
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WBVar00553082 | Name | Public_name | WBVar00553082 | ||
---|---|---|---|---|---|
Other_name | haw133217 | ||||
cewivar00095285 | |||||
C05D12.3c.3:c.2296T>G | |||||
CE36974:p.Ser766Ala | |||||
CE39469:p.Ser766Ala | |||||
C05D12.3c.1:c.2296T>G | |||||
C05D12.3a.1:c.2296T>G | |||||
C05D12.3c.2:c.2296T>G | |||||
HGVSg | CHROMOSOME_II:g.11428999T>G | ||||
Sequence_details | SMap | S_parent | Sequence | C05D12 | |
Flanking_sequences | TATTCCAATTTATTGGAACTGGAATCAAGGATATTTCCATCACTGACGCG | CTGGAAAATCAGTTTCAGTAGATTCTAACACTCGATTCCAAAATGGGAAT | |||
Mapping_target | C05D12 | ||||
Type_of_mutation | Substitution | t | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (36) | |||||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01311924 | |||
WBVar01244857 | |||||
WBVar01376773 | |||||
Status | Live | ||||
Affects | Gene | WBGene00014666 | |||
Transcript | C05D12.3a.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | C05D12.3a.1:c.2296T>G | ||||
HGVSp | CE36974:p.Ser766Ala | ||||
cDNA_position | 2308 | ||||
CDS_position | 2296 | ||||
Protein_position | 766 | ||||
Exon_number | 11/16 | ||||
Codon_change | Tct/Gct | ||||
Amino_acid_change | S/A | ||||
C05D12.3c.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | C05D12.3c.1:c.2296T>G | ||||
HGVSp | CE39469:p.Ser766Ala | ||||
cDNA_position | 2311 | ||||
CDS_position | 2296 | ||||
Protein_position | 766 | ||||
Exon_number | 11/18 | ||||
Codon_change | Tct/Gct | ||||
Amino_acid_change | S/A | ||||
C05D12.3c.3 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | C05D12.3c.3:c.2296T>G | ||||
HGVSp | CE39469:p.Ser766Ala | ||||
cDNA_position | 2296 | ||||
CDS_position | 2296 | ||||
Protein_position | 766 | ||||
Exon_number | 10/18 | ||||
Codon_change | Tct/Gct | ||||
Amino_acid_change | S/A | ||||
C05D12.3c.2 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | C05D12.3c.2:c.2296T>G | ||||
HGVSp | CE39469:p.Ser766Ala | ||||
cDNA_position | 2310 | ||||
CDS_position | 2296 | ||||
Protein_position | 766 | ||||
Exon_number | 11/17 | ||||
Codon_change | Tct/Gct | ||||
Amino_acid_change | S/A | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Yanai |