WormBase Tree Display for Variation: WBVar00322197

WBVar00322197 Evidence: Paper_evidence: WBPaper00037659
  Name: Public_name: snx4625
    Other_name: IS659_2226
      T21C12.1o.1:c.59-475C>A
      T21C12.1d.1:c.1427+154C>A
      T21C12.1f.1:c.563-475C>A
      T21C12.1c.2:c.1463+154C>A
      T21C12.1m.1:c.959+154C>A
      T21C12.1c.1:c.1463+154C>A
      T21C12.1e.1:c.1520+154C>A
    HGVSg: CHROMOSOME_III:g.10530111C>A
  Sequence_details: SMap: S_parent: Sequence: T21C12
    Flanking_sequences: TTCCCAGTGCAATCGGCCACGTTTTCTGCATGCTTGCAGTGACTAAACCA CTTCCAGAATGACGTCATCATCATCTTCCACATCATCAACTTGTGATCTA
    Mapping_target: T21C12
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022165
    Laboratory: IS
    Analysis: WGS_Jarriault
    Status: Live
  Affects: Gene: WBGene00006784
    Transcript: T21C12.1o.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1o.1:c.59-475C>A
        Intron_number: 1/5
      T21C12.1m.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1m.1:c.959+154C>A
        Intron_number: 8/8
      T21C12.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1d.1:c.1427+154C>A
        Intron_number: 12/17
      T21C12.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1c.1:c.1463+154C>A
        Intron_number: 13/18
      T21C12.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1e.1:c.1520+154C>A
        Intron_number: 14/19
      T21C12.1c.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1c.2:c.1463+154C>A
        Intron_number: 13/14
      T21C12.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1f.1:c.563-475C>A
        Intron_number: 6/11
  Genetics: Map: III
  Reference: WBPaper00037659
  Method: WGS_Jarriault