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WormBase Tree Display for Variation: WBVar00313699

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Name Class

WBVar00313699EvidencePaper_evidenceWBPaper00036201
NamePublic_nameotn16878
Other_nameOH9305_159750
T04C10.11.1:c.142-7T>A
T04C10.11.2:c.142-7T>A
T04C10.4.1:c.-71T>A
HGVSgCHROMOSOME_X:g.14810612A>T
Sequence_detailsSMapS_parentSequenceT04C10
Flanking_sequencesCGTATGCATGACCCGTAGGCTCAACAAACACAGCACGTGATTTCCTGGAAGGATCATTGTTTAAACTAATTATTAATCAATTAAAAGTTAAATGAACTTA
Mapping_targetT04C10
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00029567
LaboratoryOTN
AnalysisWGS_Hobert
StatusLive
AffectsGeneWBGene00303075
WBGene00000221
TranscriptT04C10.11.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScT04C10.11.1:c.142-7T>A
Intron_number2/4
T04C10.4.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScT04C10.4.1:c.-71T>A
cDNA_position192
Exon_number1/5
T04C10.11.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScT04C10.11.2:c.142-7T>A
Intron_number2/3
GeneticsMapX
ReferenceWBPaper00036201
MethodWGS_Hobert