WormBase Tree Display for Variation: WBVar00302183
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WBVar00302183 | Evidence | Paper_evidence | WBPaper00036201 | ||
---|---|---|---|---|---|
Name | Public_name | otn5362 | |||
Other_name | OH6071_136954 | ||||
F26F12.15:n.53A>C | |||||
F26F12.3c.1:c.-1613+256T>G | |||||
F26F12.3a.1:c.38+256T>G | |||||
HGVSg | CHROMOSOME_V:g.5845382A>C | ||||
Sequence_details | SMap | S_parent | Sequence | F26F12 | |
Flanking_sequences | CGAAAATACAGCAGCAACAATTTTCTCAACGAAAAGTGGTCACGAGTGAC | CCGACACGATGTCTCACATGCTTTATGCAGAATTTATAACTATTTTTGAG | |||
Mapping_target | F26F12 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00029486 | ||||
Laboratory | OTN | ||||
Analysis | WGS_Hobert | ||||
Status | Live | ||||
Affects | Gene | WBGene00017834 | |||
WBGene00198767 | |||||
Transcript | F26F12.3a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F26F12.3a.1:c.38+256T>G | ||||
Intron_number | 2/6 | ||||
F26F12.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26F12.3c.1:c.-1613+256T>G | ||||
Intron_number | 1/6 | ||||
F26F12.15 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26F12.15:n.53A>C | ||||
cDNA_position | 53 | ||||
Exon_number | 1/1 | ||||
Genetics | Map | V | |||
Reference | WBPaper00036201 | ||||
Method | WGS_Hobert |