WormBase Tree Display for Variation: WBVar00302027

WBVar00302027 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn5206
    Other_name: OH6071_100148
      W03B1.7c.1:c.-537+18C>T
      W03B1.7a.1:c.134+18C>T
      W03B1.7b.1:c.134+18C>T
      W03B1.7c.2:c.-576+18C>T
    HGVSg: CHROMOSOME_IV:g.4336985C>T
  Sequence_details: SMap: S_parent: Sequence: W03B1
    Flanking_sequences: AGTATTTCCAAATGGGTATCTTGGAGTTGATCAGTAAGTTTTTTGTTTTG CCTTGCATTACTACAGTGCGCGCGCTTTTTTTGACTAATAGTTGTTGTGA
    Mapping_target: W03B1
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029486
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00020976
    Transcript: W03B1.7b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W03B1.7b.1:c.134+18C>T
        Intron_number: 1/10
      W03B1.7c.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W03B1.7c.2:c.-576+18C>T
        Intron_number: 1/10
      W03B1.7c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W03B1.7c.1:c.-537+18C>T
        Intron_number: 1/11
      W03B1.7a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W03B1.7a.1:c.134+18C>T
        Intron_number: 2/11
  Genetics: Map: IV
  Reference: WBPaper00036201
  Method: WGS_Hobert