WormBase Tree Display for Variation: WBVar00300874

WBVar00300874 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn4053
    Other_name: OH4303_44166
      Y48C3A.5b.1:c.639+2312T>C
      Y48C3A.4a.1:c.761+492A>G
      Y48C3A.5d.1:c.504+2312T>C
      Y48C3A.5a.1:c.639+2312T>C
      Y48C3A.4b.1:c.770+492A>G
    HGVSg: CHROMOSOME_II:g.13282080T>C
  Sequence_details: SMap: S_parent: Sequence: Y48C3A
    Flanking_sequences: GGCGCGCATATTTTATGGGCGGAGCCTGCAAGCCACGCCTATTTTATGGG GGAGTCTACAAGCCACGCCTATTTTATGGGCGGAGTCTAGAACGCACGCC
    Mapping_target: Y48C3A
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029448
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00012989
      WBGene00012988
    Transcript: Y48C3A.5d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5d.1:c.504+2312T>C
        Intron_number: 4/9
      Y48C3A.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.4b.1:c.770+492A>G
        Intron_number: 4/6
      Y48C3A.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5b.1:c.639+2312T>C
        Intron_number: 4/11
      Y48C3A.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5a.1:c.639+2312T>C
        Intron_number: 4/10
      Y48C3A.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.4a.1:c.761+492A>G
        Intron_number: 4/6
  Genetics: Map: II
  Reference: WBPaper00036201
  Method: WGS_Hobert