WormBase Tree Display for Variation: WBVar00297315
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WBVar00297315 | Evidence | Paper_evidence | WBPaper00036201 | ||
---|---|---|---|---|---|
Name | Public_name | otn494 | |||
Other_name | OH2042_109681 | ||||
T21C12.1e.1:c.*543-102T>G | |||||
T21C12.1f.1:c.1106-102T>G | |||||
T21C12.1o.1:c.602-102T>G | |||||
T21C12.1i.1:c.233-102T>G | |||||
T21C12.1c.1:c.*543-102T>G | |||||
T21C12.1h.1:c.554-102T>G | |||||
T21C12.1d.1:c.*543-102T>G | |||||
HGVSg | CHROMOSOME_III:g.10532107T>G | ||||
Sequence_details | SMap | S_parent | Sequence | T21C12 | |
Flanking_sequences | CTGTAGGGGTAATATAGAAGTACTGTAGTTTTAACAGAAACTAGCTTTTT | AGCCGCCCATTTTTTGGCTAAAACCCATTTTTTGAGTTTCTCATGAGAAA | |||
Mapping_target | T21C12 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00029332 | ||||
Laboratory | OTN | ||||
Analysis | WGS_Hobert | ||||
Status | Live | ||||
Affects | Gene | WBGene00006784 | |||
Transcript | T21C12.1h.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1h.1:c.554-102T>G | ||||
Intron_number | 4/6 | ||||
T21C12.1o.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1o.1:c.602-102T>G | ||||
Intron_number | 4/5 | ||||
T21C12.1i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1i.1:c.233-102T>G | ||||
Intron_number | 1/2 | ||||
T21C12.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1d.1:c.*543-102T>G | ||||
Intron_number | 16/17 | ||||
T21C12.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1c.1:c.*543-102T>G | ||||
Intron_number | 17/18 | ||||
T21C12.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1e.1:c.*543-102T>G | ||||
Intron_number | 18/19 | ||||
T21C12.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1f.1:c.1106-102T>G | ||||
Intron_number | 9/11 | ||||
Genetics | Map | III | |||
Reference | WBPaper00036201 | ||||
Method | WGS_Hobert |