WormBase Tree Display for Variation: WBVar00276355
expand all nodes | collapse all nodes | view schema
WBVar00276355 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk1771 | |||
Other_name | F18A1.3l.1:c.67-719G>A | ||||
F18A1.3c.1:c.67-719G>A | |||||
F18A1.3i.1:c.67-719G>A | |||||
F18A1.3d.1:c.67-719G>A | |||||
F18A1.3b.1:c.67-719G>A | |||||
F18A1.3a.1:c.67-719G>A | |||||
HGVSg | CHROMOSOME_II:g.7680332G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F18A1 | |
Flanking_sequences | TGTAGAATGAGTTTCGCTCTTCCACGGAAC | CCACGCCCATCATCTCAACGTAGGTTCCAT | |||
Mapping_target | F18A1 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036970 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00003044 | |||
Transcript | F18A1.3l.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3l.1:c.67-719G>A | ||||
Intron_number | 2/6 | ||||
F18A1.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3b.1:c.67-719G>A | ||||
Intron_number | 2/6 | ||||
F18A1.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3a.1:c.67-719G>A | ||||
Intron_number | 2/5 | ||||
F18A1.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3c.1:c.67-719G>A | ||||
Intron_number | 2/4 | ||||
F18A1.3i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3i.1:c.67-719G>A | ||||
Intron_number | 2/6 | ||||
F18A1.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F18A1.3d.1:c.67-719G>A | ||||
Intron_number | 2/6 | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |