WormBase Tree Display for Variation: WBVar00275708

WBVar00275708 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk2795
    Other_name: C04A2.3p.1:c.*550G>A
      C04A2.3c.2:c.*550G>A
      C04A2.3c.6:c.*550G>A
      C04A2.3c.4:c.*550G>A
      C04A2.3c.1:c.*550G>A
      C04A2.3b.1:c.*550G>A
      C04A2.3a.1:c.*550G>A
      C04A2.3c.5:c.*550G>A
      C04A2.3c.3:c.*550G>A
      C04A2.3c.7:c.*550G>A
    HGVSg: CHROMOSOME_II:g.6847862G>A
  Sequence_details: SMap: S_parent: Sequence: C04A2
    Flanking_sequences: ATGTTCAAACATAGATTTATCTATGATTGT CGTTATTTGAATTCAAACAACACATGAGTA
    Mapping_target: C04A2
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00005866
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001194
    Transcript: C04A2.3c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3c.1:c.*550G>A
        cDNA_position: 3985
        Exon_number: 15/15
      C04A2.3c.6 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3c.6:c.*550G>A
        cDNA_position: 2604
        Exon_number: 6/6
      C04A2.3c.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3c.2:c.*550G>A
        cDNA_position: 3396
        Exon_number: 10/10
      C04A2.3b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3b.1:c.*550G>A
        cDNA_position: 4004
        Exon_number: 15/15
      C04A2.3a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3a.1:c.*550G>A
        cDNA_position: 4000
        Exon_number: 15/15
      C04A2.3c.5 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3c.5:c.*550G>A
        cDNA_position: 2829
        Exon_number: 7/7
      C04A2.3c.3 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3c.3:c.*550G>A
        cDNA_position: 4000
        Exon_number: 15/15
      C04A2.3p.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3p.1:c.*550G>A
        cDNA_position: 3244
        Exon_number: 9/9
      C04A2.3c.4 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3c.4:c.*550G>A
        cDNA_position: 3401
        Exon_number: 10/10
      C04A2.3c.7 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C04A2.3c.7:c.*550G>A
        cDNA_position: 2404
        Exon_number: 5/5
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele