WormBase Tree Display for Variation: WBVar00275484
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WBVar00275484 | Evidence | Paper_evidence | WBPaper00001584 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | zu120 | |||||||
Sequence_details | SeqStatus | Pending_curation | |||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Laboratory | JJ | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00003228 | |||||||
Description | Phenotype | WBPhenotype:0000050 | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0000097 | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | ABa and ABp blastomeres have abnormal lineages | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0005994 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
WBbt:0005906 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Temperature | 22C | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0000414 | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | P3-blastomere adopts a muscle fate (assayed via lineage analysis and antibody staining) | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
ABa and ABp blastomeres adopt an MS-like fate. Additional blastomeres in 28-cell stage pie-1 embryos express the CeMyoD beta-galactosidase reporter. | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Penetrance | Complete | 100 percent | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0002474 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
WBbt:0005906 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBbt:0005994 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Treatment | P3 blastomeres are isolated via laser ablation, followed by staining with 5-6 antibody. | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Target blastomeres (such as ABa or ABp) are isolated via laser ablation, followed by staining with 3NB12. Embryos were also stained with LacZ | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Temperature | 22C | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0000715 | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Mutant embryos produce excess muscle cells. | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Treatment | AB blastomeres were isolated via laser ablation, followed by staining with 5-6 monoclonal antibody (stains body wall-specific myosin). Embryos were also stained with LacZ | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Temperature | 22C | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0001302 | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | The restricted localization of P granules to germ cell precursors is altered. P granules remain dispersed throughout the Pl blastomere instead of becoming associated with the posterior-most cortex as in wild-type. During subsequent divisions, most of the P granules are localized correctly to the smaller daughters, but a substantial fraction remains in the larger daughters | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Treatment | P-granule specific antibody staining | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0001635 | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Mutants have large clusters of excess pharyngeal cells. These clusters are surrounded by a basement membrane and some of them contain grinder-like structures | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Penetrance | Complete | 100 percent | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Treatment | antibody staining with 3NB12 or 9.2.1 (stain pharyngeal-specific muscle cells) | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Temperature | 22C | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0001637 | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | mex-1 alleles show a cold-sensitive defect in producing intestinal cells. Embryos that were lacking intestinal cells, contained larger numbers of hypodermal cells instead | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Penetrance | Incomplete | 37 percent | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Temperature | 16C, 25C | Paper_evidence | WBPaper00001584 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_not_observed | WBPhenotype:0001642 | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Mutant embryos appear identical to wild-type embryos in terms of size, cleavage rate, and division axes up to the 28-cell stage (data not shown) | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001584 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00001584 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001584 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Reference | WBPaper00001584 | ||||||||
Method | Allele |