WormBase Tree Display for Variation: WBVar00275111

WBVar00275111 Evidence: Paper_evidence: WBPaper00005639
  Name: Public_name: vw5
    HGVSg: CHROMOSOME_V:g.8220931_8222760del
  Sequence_details: SMap: S_parent: Sequence: K07C11
    Flanking_sequences: gaaatgatttcaggtttattctaacttttt atttgttagaatcttaataagcagttctcc
    Mapping_target: K07C11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022763
      WBStrain00022764
    Laboratory: JS
    Status: Live
  Affects: Gene: WBGene00000098
      WBGene00044955
      WBGene00019481
    Transcript: K07C11.11 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      K07C11.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-7/8
        Exon_number: 1-7/9
      K07C11.9.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-338
        CDS_position: ?-226
        Protein_position: ?-76
        Intron_number: 2/8
        Exon_number: 1-3/9
  Isolation: Mutagen: 4,5'8-trimethylpsoralen Paper_evidence: WBPaper00005639
  Genetics: Interpolated_map_position: V 1.24026
    Mapping_data: In_multi_point: 5659
  Reference: WBPaper00005639
  Remark: Deletion endpoints estimated from text in paper [krb 030610] Paper_evidence: WBPaper00005639
  Method: Deletion_allele