WormBase Tree Display for Variation: WBVar00274499

WBVar00274499 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00274499
    Other_name: uCE6-1183
      F11A1.3e.4:c.661-305_661-302del
      F11A1.3g.1:c.838-305_838-302del
      F11A1.3f.1:c.736-305_736-302del
      F11A1.3e.3:c.661-305_661-302del
      F11A1.3e.1:c.661-305_661-302del
      F11A1.3b.1:c.661-305_661-302del
      F11A1.3a.1:c.838-305_838-302del
      F11A1.3d.1:c.736-305_736-302del
      F11A1.3e.2:c.661-305_661-302del
    HGVSg: CHROMOSOME_X:g.10662490_10662493del
  Sequence_details: SMap: S_parent: Sequence: F11A1
    Flanking_sequences: ACAAATCCAGACAACAGTTGTTTTTGAACTTTTTTCATTGAATGTCTCGGATTATTGGGTGTTGATGAGTGTCTGTCTGCATGACAAATTTGTTTTAAACG GACTTAAGATTAAACAGATGCGAACATATTGAGATATATCCCTTTTTAGGTTGTTAGTTTAGCATATCAAAGTTTTTTAGTCAATGTGAGAATATT
    Mapping_target: F11A1
    Type_of_mutation: Deletion: AAGG
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Laboratory: EU
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00000908
    Transcript: F11A1.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3b.1:c.661-305_661-302del
        Intron_number: 6/14
      F11A1.3e.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3e.2:c.661-305_661-302del
        Intron_number: 8/18
      F11A1.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3e.1:c.661-305_661-302del
        Intron_number: 9/19
      F11A1.3e.4 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3e.4:c.661-305_661-302del
        Intron_number: 8/18
      F11A1.3f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3f.1:c.736-305_736-302del
        Intron_number: 8/17
      F11A1.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3a.1:c.838-305_838-302del
        Intron_number: 8/17
      F11A1.3g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3g.1:c.838-305_838-302del
        Intron_number: 9/18
      F11A1.3e.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3e.3:c.661-305_661-302del
        Intron_number: 10/20
      F11A1.3d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F11A1.3d.1:c.736-305_736-302del
        Intron_number: 7/15
  Reference: WBPaper00005369
  Method: SNP_Swan