WormBase Tree Display for Variation: WBVar00273988
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| WBVar00273988 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00273988 | |||
| Other_name | uCE6-635 | ||||
| cewivar00269357 | |||||
| K06A9.1f.1:c.4825+1014A>G | |||||
| K06A9.1c.1:c.1894+2307A>G | |||||
| K06A9.1g.1:c.5101+738A>G | |||||
| K06A9.1d.1:c.3532+2307A>G | |||||
| K06A9.1b.1:c.5710A>G | |||||
| K06A9.1a.1:c.2770+3069A>G | |||||
| CE53577:p.Thr1904Ala | |||||
| K06A9.1e.1:c.4279+1560A>G | |||||
| HGVSg | CHROMOSOME_X:g.1553647A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | K06A9 | |
| Flanking_sequences | AGCTAGCCCTGCTGCGAGTTCCACAGCTCCATCTTCAACTGGAACTATGAGCTCCACTTCTAGTGGAACAGTTGGATCTACAATTTCTGAATCATCGACA | CAGCATCTGCAAGTTCTCAGACTGGAAGCACTGTAACCATGGGATCATCAAGCACTTCCGGTGTTTCCACATCTTCAGCATCCAGTACTCAGCCTCAGAT | |||
| Mapping_target | K06A9 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| Analysis | SNP_Swan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019435 | |||
| Transcript | K06A9.1d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1d.1:c.3532+2307A>G | ||||
| Intron_number | 7/12 | ||||
| K06A9.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1c.1:c.1894+2307A>G | ||||
| Intron_number | 8/14 | ||||
| K06A9.1b.1 (11) | |||||
| K06A9.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1g.1:c.5101+738A>G | ||||
| Intron_number | 7/12 | ||||
| K06A9.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1e.1:c.4279+1560A>G | ||||
| Intron_number | 7/12 | ||||
| K06A9.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1f.1:c.4825+1014A>G | ||||
| Intron_number | 7/12 | ||||
| K06A9.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1a.1:c.2770+3069A>G | ||||
| Intron_number | 8/14 | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
