WormBase Tree Display for Variation: WBVar00273489
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| WBVar00273489 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00273489 | |||
| Other_name | uCE5-3003 | ||||
| cewivar00263735 | |||||
| Y43F8B.3d.1:c.1937-124C>G | |||||
| Y43F8B.3f.1:c.1772-124C>G | |||||
| Y43F8B.3h.1:c.830-537C>G | |||||
| Y43F8B.3a.1:c.1937-124C>G | |||||
| Y43F8B.3g.1:c.2186-124C>G | |||||
| Y43F8B.3c.1:c.1937-124C>G | |||||
| Y43F8B.3e.1:c.1772-124C>G | |||||
| Y43F8B.3b.1:c.1937-124C>G | |||||
| HGVSg | CHROMOSOME_V:g.19513818C>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y43F8B | |
| Flanking_sequences | AGTCACAGTTGTGTCAATAGTGGTCAGATTGCTAGCCTAAATCTGAATATTAGGCCCGATTTGGCTTGAGTTTGGTGCAGATCAACCTAATCTGGTTATG | CTAGGCGTAGGCCTAGGCATAGGGCCTAGGTGCACCACAGCACCGCCAACTAAAAACGAAATGGCCAGAGAAATTCGCCGCGCCGAAAACTTCAATTATC | |||
| Mapping_target | Y43F8B | ||||
| Type_of_mutation | Substitution | C | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| Analysis | SNP_Swan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012814 | |||
| Transcript | Y43F8B.3b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8B.3b.1:c.1937-124C>G | ||||
| Intron_number | 9/19 | ||||
| Y43F8B.3g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8B.3g.1:c.2186-124C>G | ||||
| Intron_number | 9/18 | ||||
| Y43F8B.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8B.3e.1:c.1772-124C>G | ||||
| Intron_number | 9/15 | ||||
| Y43F8B.3h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8B.3h.1:c.830-537C>G | ||||
| Intron_number | 7/16 | ||||
| Y43F8B.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8B.3d.1:c.1937-124C>G | ||||
| Intron_number | 9/21 | ||||
| Y43F8B.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8B.3a.1:c.1937-124C>G | ||||
| Intron_number | 10/17 | ||||
| Y43F8B.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8B.3c.1:c.1937-124C>G | ||||
| Intron_number | 10/20 | ||||
| Y43F8B.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F8B.3f.1:c.1772-124C>G | ||||
| Intron_number | 9/19 | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
