WormBase Tree Display for Variation: WBVar00273369
expand all nodes | collapse all nodes | view schema
WBVar00273369 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00273369 | |||
Other_name | uCE5-2867 | ||||
C54E10.4.1:c.*5-50del | |||||
C54E10.10.1:c.34-50del | |||||
HGVSg | CHROMOSOME_V:g.18803108del | ||||
Sequence_details | SMap | S_parent | Sequence | C54E10 | |
Flanking_sequences | TGCCGGGGCATTGTCTTGGCAAAGGGCTCCGAATAGGAAGAGAGCAGCGATCTGAAACATTAATTTTTGGCGTTCCTATAAGTTTTTATGCTAAAAAAAA | TTGAAAATTCAAGTTTTACAAGCTTTAATTACTATAGAAAACGTAAATAAAAAAATCTGCCACAGCGGGGCTCGAACCCCGGTCTTGTGATTGGTAGTCG | |||
Mapping_target | C54E10 | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00206523 | |||
WBGene00005522 | |||||
Transcript | C54E10.10.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C54E10.10.1:c.34-50del | ||||
Intron_number | 1/2 | ||||
C54E10.4.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54E10.4.1:c.*5-50del | ||||
Intron_number | 8/8 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |