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WormBase Tree Display for Variation: WBVar00273369

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Name Class

WBVar00273369EvidencePaper_evidenceWBPaper00005369
NamePublic_nameWBVar00273369
Other_nameuCE5-2867
C54E10.4.1:c.*5-50del
C54E10.10.1:c.34-50del
HGVSgCHROMOSOME_V:g.18803108del
Sequence_detailsSMapS_parentSequenceC54E10
Flanking_sequencesTGCCGGGGCATTGTCTTGGCAAAGGGCTCCGAATAGGAAGAGAGCAGCGATCTGAAACATTAATTTTTGGCGTTCCTATAAGTTTTTATGCTAAAAAAAATTGAAAATTCAAGTTTTACAAGCTTTAATTACTATAGAAAACGTAAATAAAAAAATCTGCCACAGCGGGGCTCGAACCCCGGTCTTGTGATTGGTAGTCG
Mapping_targetC54E10
Type_of_mutationDeletionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
AnalysisSNP_Swan
StatusLive
AffectsGeneWBGene00206523
WBGene00005522
TranscriptC54E10.10.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54E10.10.1:c.34-50del
Intron_number1/2
C54E10.4.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54E10.4.1:c.*5-50del
Intron_number8/8
ReferenceWBPaper00005369
MethodSNP_Swan