WormBase Tree Display for Variation: WBVar00273332
expand all nodes | collapse all nodes | view schema
WBVar00273332 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00273332 | |||
Other_name | uCE5-2820 | ||||
cewivar00260995 | |||||
CE35102:p.Pro163Ser | |||||
Y51A2B.5.1:c.487C>T | |||||
HGVSg | CHROMOSOME_V:g.18391197C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y51A2B | |
Flanking_sequences | TCGGCTCCCAGTGGTCAAAAACCTTTGAAAATTTTTGTGTACTTTCAGATTCGCATTCTAAATTTGAATTTTCAGCCAACCATCAATGCCTCTGCCACTC | CAAAATCCGACAAAAAGCCCGGCACCGAATGCGGATCGAATGGACACGGCGAGGATGGTCTTTGTGTGGAGAATACATAGAACGCTAGGAAATTACAAAA | |||
Mapping_target | Y51A2B | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
Analysis | SNP_Swan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00013069 | |||
Transcript | Y51A2B.5.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | Y51A2B.5.1:c.487C>T | ||||
HGVSp | CE35102:p.Pro163Ser | ||||
cDNA_position | 490 | ||||
CDS_position | 487 | ||||
Protein_position | 163 | ||||
Exon_number | 4/5 | ||||
Codon_change | Cca/Tca | ||||
Amino_acid_change | P/S | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |