WormBase Tree Display for Variation: WBVar00273198
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| WBVar00273198 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00273198 | |||
| Other_name | uCE5-2671 | ||||
| cewivar00258370 | |||||
| F59A1.18.1:c.189A>C | |||||
| CE46235:p.Ter63CysextTer22 | |||||
| HGVSg | CHROMOSOME_V:g.17686256T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F59A1 | |
| Flanking_sequences | AAATTTGAACAGTTGTCGCGTTTTTGTTGGTCGGCCAATATTCTGCGAAAAGTTTGAAGCATGGGTCTCCGATGGATGGCATGTGAGCTGTTAGCGACGT | CAGAGGGTGTCCTGAAATTGATTTTTGTGACTTTTAGGTGGTTTTAGAAGCAAAATTGACTTGAAAATCAGAAAGAGCATTAAATTTTATCCTATGGTCG | |||
| Mapping_target | F59A1 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (21) | |||||
| Analysis | SNP_Swan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00206506 | |||
| Transcript | F59A1.18.1 | VEP_consequence | stop_lost | ||
| VEP_impact | HIGH | ||||
| HGVSc | F59A1.18.1:c.189A>C | ||||
| HGVSp | CE46235:p.Ter63CysextTer22 | ||||
| cDNA_position | 202 | ||||
| CDS_position | 189 | ||||
| Protein_position | 63 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | tgA/tgC | ||||
| Amino_acid_change | */C | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
