WormBase Tree Display for Variation: WBVar00273177

WBVar00273177 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00273177
    Other_name: uCE5-2649
      cewivar00258292
      F59A1.19:n.398A>G
      F59A1.11a.1:c.-659A>G
    HGVSg: CHROMOSOME_V:g.17665428T>C
  Sequence_details: SMap: S_parent: Sequence: F59A1
    Flanking_sequences: GGGGTTCGACCCCCAGCAATGACATATAGATTTTTCTAGACAGAGAATTCGATTTTCACACTCTTAAAACTCTAAAAACTAACTTTTTAATGATAAATAT CTATGAAGATTGAAAAGCATCAAAAAATCTTGGGTACTCGAGGAAAAACTCTCCATTGTAAGGGTATACACCAATTTTTCATTTGTAGAAAACTGCCAAA
    Mapping_target: F59A1
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Swan
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00010297
      WBGene00219549
    Transcript: F59A1.11a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F59A1.11a.1:c.-659A>G
        cDNA_position: 407
        Exon_number: 3/11
    Pseudogene: F59A1.19 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: F59A1.19:n.398A>G
        cDNA_position: 398
        Exon_number: 3/5
  Reference: WBPaper00005369
  Method: SNP_Swan