WormBase Tree Display for Variation: WBVar00273164
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WBVar00273164 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00273164 | |||
Other_name | uCE5-2634 | ||||
cewivar00258224 | |||||
F59A1.7.2:c.273T>A | |||||
F59A1.7.1:c.273T>A | |||||
CE39259:p.Gly91= | |||||
HGVSg | CHROMOSOME_V:g.17657684A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F59A1 | |
Flanking_sequences | GATTTTCAATCAATACTGTAACGTCATTTAAAGCTATTTTCAAGGCATTTTTCGTAAAACAACGTTTCTCTCGATGATTGAATTGAACTGTGCAAGTTTG | CCATCGAAATCCTGAGTTATGGCGACATTTTTTGCATCGTGGAGCACAAAACTGAATAAATCCTTAAATAAGTCGAGCCGAAGACGCTTGAAACCCGGAT | |||
Mapping_target | F59A1 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Swan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00010293 | |||
Transcript | F59A1.7.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F59A1.7.1:c.273T>A | ||||
HGVSp | CE39259:p.Gly91= | ||||
cDNA_position | 308 | ||||
CDS_position | 273 | ||||
Protein_position | 91 | ||||
Exon_number | 4/6 | ||||
Codon_change | ggT/ggA | ||||
Amino_acid_change | G | ||||
F59A1.7.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F59A1.7.2:c.273T>A | ||||
HGVSp | CE39259:p.Gly91= | ||||
cDNA_position | 386 | ||||
CDS_position | 273 | ||||
Protein_position | 91 | ||||
Exon_number | 5/7 | ||||
Codon_change | ggT/ggA | ||||
Amino_acid_change | G | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |