WormBase Tree Display for Variation: WBVar00272723

WBVar00272723 Name: Public_name: WBVar00272723
    Other_name: uCE5-2137
      haw171722
      cewivar00245613
      T06E6.10.1:c.28T>C
      CE13331:p.Leu10=
    HGVSg: CHROMOSOME_V:g.15418181T>C
  Sequence_details: SMap: S_parent: Sequence: T06E6
    Flanking_sequences: TTTAAAAAATACCATAAAATTTATAAAAACTTAATACAATTCAATTTTTTAGGTGATTCTGGTGCTACTAGCCATGATTTTGTTGATACTTCTGAGCTCT TGATCATGGGAGCAAGTACAGGTGAGAGTTTTGAAAAATGTGCCTGCAACTGACATACAACCTTTTTTCAGGAAAAACTGGAATAACTTGCGCCAATGTT
    Mapping_target: T06E6
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Person: WBPerson4037
    Analysis: SNP_Swan
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00591587
    Status: Live
  Affects: Gene: WBGene00011540
    Transcript: T06E6.10.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T06E6.10.1:c.28T>C
        HGVSp: CE13331:p.Leu10=
        cDNA_position: 60
        CDS_position: 28
        Protein_position: 10
        Exon_number: 2/9
        Codon_change: Ttg/Ctg
        Amino_acid_change: L
  Reference: WBPaper00038208
    WBPaper00005369
  Method: SNP_Swan