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WormBase Tree Display for Variation: WBVar00272058

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Name Class

WBVar00272058EvidencePaper_evidenceWBPaper00005369
NamePublic_nameWBVar00272058
Other_nameuCE5-1398
F26F12.3b.2:c.-116C>G
F26F12.3b.1:c.-116C>G
F26F12.3b.3:c.-116C>G
F26F12.3a.1:c.140C>G
F26F12.3c.1:c.-1511C>G
CE36538:p.Ala47Gly
HGVSgCHROMOSOME_V:g.5844131G>C
Sequence_detailsSMapS_parentSequenceF26F12
Flanking_sequencesCGAGGCGATGCCATCGTGGCTTTCCGAAGCGACGCGCTCCTTGCGCTTCTTTCCGAGCACGTGGTTCGGATCGTCGATGGTCTTGACGAGGAATGCGCCACCTTGGCGGCCTGGCGTGCATGGCGGTTGGCCACCGCGCTACGTCTGCCCTTCTCCTTCCTGCCCGTCAGTTTGCCACTCAATTCCGGGAATTCCGTTTC
Mapping_targetF26F12
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
AnalysisSNP_Swan
StatusLive
AffectsGeneWBGene00017834
TranscriptF26F12.3b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF26F12.3b.1:c.-116C>G
cDNA_position265
Exon_number2/7
F26F12.3b.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF26F12.3b.2:c.-116C>G
cDNA_position227
Exon_number2/7
F26F12.3a.1 (12)
F26F12.3c.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF26F12.3c.1:c.-1511C>G
cDNA_position161
Exon_number2/7
F26F12.3b.3VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF26F12.3b.3:c.-116C>G
cDNA_position109
Exon_number1/6
ReferenceWBPaper00005369
MethodSNP_Swan