WormBase Tree Display for Variation: WBVar00272028

WBVar00272028 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00272028
    Other_name: uCE5-1365
      CE25783:p.Phe878LeufsTer22
      C18C4.2.1:c.2634del
    HGVSg: CHROMOSOME_V:g.5543726del
  Sequence_details: SMap: S_parent: Sequence: C18C4
    Flanking_sequences: TTGTCGGACTACTTCGGTATTTCCTGCCAGCTCTTCACAAAATTTCGAGCCTCGAGGAACAAAAACGAGACTTATTTCTGTGCGGGTCTATTGAAGATTT GAAGCAAGAATTATGGTGCGAACGTTTGGAAAGGTAGTTTTAAACTTTTATTTTCCAGAAAAAAATGAATAGAAATGTTTTCAGACACGCCAAACGCTTG
    Mapping_target: C18C4
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00000477
    Transcript: C18C4.2.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: C18C4.2.1:c.2634del
        HGVSp: CE25783:p.Phe878LeufsTer22
        cDNA_position: 2634
        CDS_position: 2634
        Protein_position: 878
        Exon_number: 14/21
        Codon_change: ttT/tt
        Amino_acid_change: F/X
  Reference: WBPaper00005369
  Method: SNP_Swan