WormBase Tree Display for Variation: WBVar00271939

WBVar00271939 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00271939
    Other_name: uCE5-1267
      Y58A7A.3.2:c.1788C>T
      Y58A7A.3.1:c.1788C>T
      CE26196:p.Tyr596=
    HGVSg: CHROMOSOME_V:g.5078841G>A
  Sequence_details: SMap: S_parent: Sequence: Y58A7A
    Flanking_sequences: AACGATTTTGAGTTTTATTTTCATTCCCTGGTTCTTCGAAAAATATAGTTGACTTGCAAGAAGGGCACTTTTCAAAATCTCCAGTTGCACCAAGATCCTT TAAATAGTTTCCGCAACTGTCTGAATATGTTACACTAAACATTATACTTCACTTGAAATAAACTTACTCGAATATAAAGATTCAGAAGAGTAAGTGGAAT
    Mapping_target: Y58A7A
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00021977
    Transcript: Y58A7A.3.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y58A7A.3.1:c.1788C>T
        HGVSp: CE26196:p.Tyr596=
        cDNA_position: 1867
        CDS_position: 1788
        Protein_position: 596
        Exon_number: 6/8
        Codon_change: taC/taT
        Amino_acid_change: Y
      Y58A7A.3.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y58A7A.3.2:c.1788C>T
        HGVSp: CE26196:p.Tyr596=
        cDNA_position: 1860
        CDS_position: 1788
        Protein_position: 596
        Exon_number: 6/8
        Codon_change: taC/taT
        Amino_acid_change: Y
  Reference: WBPaper00005369
  Method: SNP_Swan