WormBase Tree Display for Variation: WBVar00271798
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WBVar00271798 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00271798 | |||
Other_name | uCE5-1110 | ||||
cewivar00230741 | |||||
T20C7.1:n.200+6T>C | |||||
HGVSg | CHROMOSOME_V:g.3909346T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T20C7 | |
Flanking_sequences | AATAACTCTTTCGGATACCTTTCCGCAAACCAATCTCTCGTAGATGCTTTTCATTCCATCATTTTCTTAGTTTACTTCTGTCCAATGGTTCTTTTGTAAG | CGAAATCACAAAAATTTATTGTTAAAAGATTTAAATTTAAGGAATCAACAAATCATGAAAGACTATTCATATTTTATGGGCTTCGGTCTTGTTTTCTGCT | |||
Mapping_target | T20C7 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
Analysis | SNP_Swan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00005952 | |||
Pseudogene | T20C7.1 | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | ||
VEP_impact | LOW | ||||
HGVSc | T20C7.1:n.200+6T>C | ||||
Intron_number | 2/6 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |