WormBase Tree Display for Variation: WBVar00271732

WBVar00271732 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00271732
    Other_name: uCE5-1036
      cewivar00229424
      W08A12.3a.1:c.594-419G>A
      W08A12.3b.1:c.204-419G>A
      W08A12.2a.1:c.-60C>T
    HGVSg: CHROMOSOME_V:g.3685778G>A
  Sequence_details: SMap: S_parent: Sequence: W08A12
    Flanking_sequences: GAAAGTAAAATTGTGAAAACGAATAGCGTCGATGTTTTCATGTTTGAGACTTTGGGGCGGATTCGCGCCTTTTTATAAGAAATTCTGATCAGTTAACCAC GAAATTTGGGGGAAAAATATGGCGGGGAGGACAAACGAGGCTAAATAATGTTGAAAACATTTCGTTTTTTTTCTGCAAAATGTCTCGTTTACCGTCTACG
    Mapping_target: W08A12
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Swan
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00021080
      WBGene00021079
    Transcript: W08A12.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.3b.1:c.204-419G>A
        Intron_number: 2/2
      W08A12.2a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.2a.1:c.-60C>T
        cDNA_position: 115
        Exon_number: 1/4
      W08A12.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.3a.1:c.594-419G>A
        Intron_number: 4/5
  Reference: WBPaper00005369
  Method: SNP_Swan