WormBase Tree Display for Variation: WBVar00271673
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| WBVar00271673 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00271673 | |||
| Other_name | uCE5-964 | ||||
| cewivar00228696 | |||||
| F27E11.3.1:c.367C>T | |||||
| CE39149:p.Leu123= | |||||
| HGVSg | CHROMOSOME_V:g.3443857G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F27E11 | |
| Flanking_sequences | TGATGCCCCTTGTGCTGCTTCTTTGGTGTATCTGGTGGAGCTGCACAGATGTTCCCAGTCGACATCTGATCCGACATCTTTGGCAGCGCCTCGCAAGACA | TGTCTCGGGCCATCTGAATCCGTACTTGGCCATTATTGGACTGCACTTGCTGCGTGCCTCCACACAAAGTTCCATGCACGGGAGAATTGGTTTGTCGTAG | |||
| Mapping_target | F27E11 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| Analysis | SNP_Swan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000478 | |||
| Transcript | F27E11.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F27E11.3.1:c.367C>T | ||||
| HGVSp | CE39149:p.Leu123= | ||||
| cDNA_position | 369 | ||||
| CDS_position | 367 | ||||
| Protein_position | 123 | ||||
| Exon_number | 3/6 | ||||
| Codon_change | Ctg/Ttg | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
