WormBase Tree Display for Variation: WBVar00271671

WBVar00271671 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00271671
    Other_name: uCE5-962
      F27E11.3.1:c.487_492del
      CE39149:p.Gln166_Asn167del
    HGVSg: CHROMOSOME_V:g.3443732_3443737del
  Sequence_details: SMap: S_parent: Sequence: F27E11
    Flanking_sequences: TTACAAGTGCACTGACACTCGCTGGGACCGGCTATTACTTCATTGTCGATCTTGGAAATTCCGACTTCTGGGCCATCTGGACTATAGTTATGATTTTGATT CTGGTTCTGATTCTTATGATGATGCCCCTTGTGCTGCTTCTTTGGTGTATCTGGTGGAGCTGCACAGATGTTCCCAGTCGACATCTGATCCGAC
    Mapping_target: F27E11
    Type_of_mutation: Deletion: TTGATT
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00000478
    Transcript: F27E11.3.1 VEP_consequence: inframe_deletion
        VEP_impact: MODERATE
        HGVSc: F27E11.3.1:c.487_492del
        HGVSp: CE39149:p.Gln166_Asn167del
        cDNA_position: 489-494
        CDS_position: 487-492
        Protein_position: 163-164
        Exon_number: 3/6
        Codon_change: AATCAA/-
        Amino_acid_change: NQ/-
  Reference: WBPaper00005369
  Method: SNP_Swan