WormBase Tree Display for Variation: WBVar00271566
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WBVar00271566 | Name | Public_name | WBVar00271566 | ||
---|---|---|---|---|---|
Other_name | uCE5-850 | ||||
haw162938 | |||||
cewivar00226220 | |||||
CE17110:p.Asn134= | |||||
F54E2.6.1:c.402T>C | |||||
HGVSg | CHROMOSOME_V:g.2817663A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F54E2 | |
Flanking_sequences | ACCATATTCCATAGATGATAGGAAGAATCAGCAGTAGGTAGGTTCGTTTATCATCGAAAAGCACATGCCCATTGTCAGGAAATGTTAAATCTAACGACCT | TTTGCAACCAACAGAATTGTCGTGAGACATGAGCAATACCAAAAACTTTTGCCAACAGTTCCGGAAATGTAGATCAAATTTGGATATGAACAGAACACGG | |||
Mapping_target | F54E2 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | SNP_Swan | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00582803 | |||
Status | Live | ||||
Affects | Gene | WBGene00018826 | |||
Transcript | F54E2.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F54E2.6.1:c.402T>C | ||||
HGVSp | CE17110:p.Asn134= | ||||
cDNA_position | 402 | ||||
CDS_position | 402 | ||||
Protein_position | 134 | ||||
Exon_number | 2/3 | ||||
Codon_change | aaT/aaC | ||||
Amino_acid_change | N | ||||
Reference | WBPaper00038208 | ||||
WBPaper00005369 | |||||
Method | SNP_Swan |