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WormBase Tree Display for Variation: WBVar00271566

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Name Class

WBVar00271566NamePublic_nameWBVar00271566
Other_nameuCE5-850
haw162938
cewivar00226220
CE17110:p.Asn134=
F54E2.6.1:c.402T>C
HGVSgCHROMOSOME_V:g.2817663A>G
Sequence_detailsSMapS_parentSequenceF54E2
Flanking_sequencesACCATATTCCATAGATGATAGGAAGAATCAGCAGTAGGTAGGTTCGTTTATCATCGAAAAGCACATGCCCATTGTCAGGAAATGTTAAATCTAACGACCTTTTGCAACCAACAGAATTGTCGTGAGACATGAGCAATACCAAAAACTTTTGCCAACAGTTCCGGAAATGTAGATCAAATTTGGATATGAACAGAACACGG
Mapping_targetF54E2
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
PersonWBPerson4037
AnalysisSNP_Swan
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00582803
StatusLive
AffectsGeneWBGene00018826
TranscriptF54E2.6.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF54E2.6.1:c.402T>C
HGVSpCE17110:p.Asn134=
cDNA_position402
CDS_position402
Protein_position134
Exon_number2/3
Codon_changeaaT/aaC
Amino_acid_changeN
ReferenceWBPaper00038208
WBPaper00005369
MethodSNP_Swan