WormBase Tree Display for Variation: WBVar00271550
expand all nodes | collapse all nodes | view schema
WBVar00271550 | Name | Public_name | WBVar00271550 | ||
---|---|---|---|---|---|
Other_name | uCE5-834 | ||||
haw162829 | |||||
cewivar00225853 | |||||
R05D8.1:n.825T>C | |||||
HGVSg | CHROMOSOME_V:g.2779013T>C | ||||
Sequence_details | SMap | S_parent | Sequence | R05D8 | |
Flanking_sequences | ACTGCTCTGGGCGCTAACTATTCAAACACTGATTCCGATTTGTGTCAGTTTTATTGCCATGTTGCCTTGTTATGTACGGATCCGCTTTTAAAATTGGGTT | CCGAGGTTTGTAGGAAAAAATTGAAGAGAATATGATCTGTGTAGTACCTTACAGTTGGATTAACTGGGGCTCTTCAATAGCGGTTTCGATGTTCCCATTT | |||
Mapping_target | R05D8 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Person | WBPerson4037 | ||||
Analysis | SNP_Swan | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00582694 | |||
Status | Live | ||||
Affects | Gene | WBGene00005605 | |||
Pseudogene | R05D8.1 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R05D8.1:n.825T>C | ||||
cDNA_position | 825 | ||||
Exon_number | 6/7 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00005369 | |||||
Method | SNP_Swan |