WormBase Tree Display for Variation: WBVar00271537
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| WBVar00271537 | Name | Public_name | WBVar00271537 | ||
|---|---|---|---|---|---|
| Other_name | uCE5-820 | ||||
| haw162595 | |||||
| cewivar00225333 | |||||
| W02G9.2a.1:c.-52+3887T>C | |||||
| W02G9.2b.1:c.60+3887T>C | |||||
| HGVSg | CHROMOSOME_V:g.2675410T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | W02G9 | |
| Flanking_sequences | TTCGCTAAGAGATGTTTTGCGCGTCAAATATGCTGCGCAGTACGCATTCTCAGAATTTTGTGTTCCCGTAATATCATCACGGCCCGAGAACTGGTACTCT | AAAAACGACACCTTCATTTTATGAAATTTGAAAAACAAAATGATCGAAAAAAAAAATTCTCTAATTTTTACACGGAATTCTGGCTTCCTTCATAAATTGA | |||
| Mapping_target | W02G9 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (43) | |||||
| Laboratory | QX | ||||
| Person | WBPerson4037 | ||||
| WBPerson1730 | |||||
| Analysis | SNP_Swan | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00582460 | |||
| WBVar01458615 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020952 | |||
| Transcript | W02G9.2a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02G9.2a.1:c.-52+3887T>C | ||||
| Intron_number | 1/8 | ||||
| W02G9.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02G9.2b.1:c.60+3887T>C | ||||
| Intron_number | 1/6 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
