WormBase Tree Display for Variation: WBVar00271330
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| WBVar00271330 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00271330 | |||
| Other_name | uCE5-607 | ||||
| cewivar00220907 | |||||
| CE50681:p.Tyr111= | |||||
| F31F4.2.1:c.333C>T | |||||
| HGVSg | CHROMOSOME_V:g.683297C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F31F4 | |
| Flanking_sequences | ACATCGGCCTTGCCTCTATTATATTACACGAATGCTCAAATATGCTCAGCCTCCTGATGGCTCTCAACCGTTTTTTCGCAGTATTCTGGTACCTTCGATA | AATCGAATTTTCTCGAATTCCAACACGACCTTCATGAAAAATTTTGGCGGACTAGTTTTCGCTGTGATTTATTACATTTTATACGACTATCTTGGCTGCT | |||
| Mapping_target | F31F4 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (12) | |||||
| Analysis | SNP_Swan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00005914 | |||
| Transcript | F31F4.2.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F31F4.2.1:c.333C>T | ||||
| HGVSp | CE50681:p.Tyr111= | ||||
| cDNA_position | 333 | ||||
| CDS_position | 333 | ||||
| Protein_position | 111 | ||||
| Exon_number | 3/5 | ||||
| Codon_change | taC/taT | ||||
| Amino_acid_change | Y | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
