WormBase Tree Display for Variation: WBVar00270643
expand all nodes | collapse all nodes | view schema
| WBVar00270643 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00270643 | |||
| Other_name | uCE4-1004 | ||||
| CE51026:p.Ser3294Ile | |||||
| F45E4.3b.1:c.9881G>T | |||||
| F45E4.3a.1:c.9881G>T | |||||
| CE51009:p.Ser3294Ile | |||||
| HGVSg | CHROMOSOME_IV:g.7599651G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y2C2A | |
| Flanking_sequences | catgtgaagaaccagtgatggaatccaaagaaccagaactgacacaagaagagattgatcatattgcttggattcaaagcattgcagaacaatcatcattcgaacaggcttcaacgattcctgatcgaccacctcttccagtccggcttccgactgtagacgagccgattgtca | ctcagaacaacacgaagatgacagatcaagtgcaacatcaggaactgattatgaaagatccttcgatcaagacgtcacgtatgaaagatcttcaccattgcttgaaccaagtgaagaaccagtgatgttatccaaggaagcagaactgacacaagaagagattgatcacattgcaattatccaga | |||
| Mapping_target | Y2C2A | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| Analysis | SNP_Swan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00018468 | |||
| Transcript | F45E4.3b.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | F45E4.3b.1:c.9881G>T | ||||
| HGVSp | CE51026:p.Ser3294Ile | ||||
| cDNA_position | 9881 | ||||
| CDS_position | 9881 | ||||
| Protein_position | 3294 | ||||
| Exon_number | 11/33 | ||||
| Codon_change | aGc/aTc | ||||
| Amino_acid_change | S/I | ||||
| F45E4.3a.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | F45E4.3a.1:c.9881G>T | ||||
| HGVSp | CE51009:p.Ser3294Ile | ||||
| cDNA_position | 9881 | ||||
| CDS_position | 9881 | ||||
| Protein_position | 3294 | ||||
| Exon_number | 11/41 | ||||
| Codon_change | aGc/aTc | ||||
| Amino_acid_change | S/I | ||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
